This function calculates most variable genes from either Seurat or anndata objects.
Usage
get_var_genes(obj, obj_type, assay_name)
Arguments
- obj
object to get variable genes from
- obj_type
type of object being used. can be 'seurat' or 'anndata'
- assay_name
name of assay for variable genes. Ignored if obj_type == 'anndata'.
Value
vector of gene names