Make an enrichResult obj from a data frame

Most of the parameters are just placeholders and the dataframe must contain the columns 'ID' and 'geneID'

Usage

makeEnrichResult(
  df,
  split = "/",
  keytype = "UNKNOWN",
  ontology = "UNKNOWN",
  type = "enrichResult"
)

Arguments

df

data frame with functional enrichment results

split

string, character used to split gene IDs

keytype

type of gene ID

ontology

ontology database being used

type

string, can be 'enrichResult' or 'gseaResult'

Value

enrichResult object

Examples

# get enrichResult object
data(eres_dex, package='carnation')

# extract the results
df <- as.data.frame(eres_dex)

# convert to a stripped down enrichResult object
eres2 <- makeEnrichResult(df)