A DESeqResults object testing the difference between two cell lines of smooth muscle cells
Source: R/carnation-data.R
res_cell.RdA DESeqResults object testing the difference between
two cell lines of smooth muscle cells
Details
This DESeqResults object on the data from the airway package
has been created comparing two smooth muscle cell lines,
accounting for the effect of dexamethasone treatment.
Details on how this object has been created are included in the
create_carnation_data.R script, included in the scripts folder of the
Carnation package.
References
Himes BE, Jiang X, Wagner P, Hu R, Wang Q, Klanderman B, Whitaker RM, Duan Q, Lasky-Su J, Nikolos C, Jester W, Johnson M, Panettieri R Jr, Tantisira KG, Weiss ST, Lu Q. “RNA-Seq Transcriptome Profiling Identifies CRISPLD2 as a Glucocorticoid Responsive Gene that Modulates Cytokine Function in Airway Smooth Muscle Cells.” PLoS One. 2014 Jun 13;9(6):e99625. PMID: 24926665. GEO: GSE52778