Changelog¶
2024-09-10¶
Added more info on R resource descriptions
Split scRNA-seq off into its own section (it was previously under R)
Fixed broken links
2024-01-08¶
New section on using RStudio Server on Biowulf (NIH only)
2022-12-23¶
new page on ssh
new page on rsync
2022-12-13¶
New page on Galaxy (thanks @lillypi)
2022-10-27¶
Added a new section on conda
2021-08-30¶
Added change log
Added links to Bitbucket’s git tutorials to the git page
Reviewed the Harvard Bioinformatics Core links on the RNA-seq page and updated as appropriate
Added info on RPKM etc on the RNA-seq page
On the R page, added notes and resources on scRNA-seq because that’s why many people want to learn R these days
2021-08-11¶
Added new page on GitLab CI/CD
2021-02-13¶
A round of edits and clarification on choosing R or Python
Added some intermediate Bash links
Spelled out the “10 simple rules for biologists learning to program” on the first steps page
2020-08-10¶
Updated git section
2020-06-18¶
Added a link about factors in R
2020-06-10¶
Add resources for experimental design on RNA-seq page
2020-05-08¶
Add link to strand-specific protocols on RNA-seq page
2020-05-04¶
Add link to model formulas in R on the R page
2020-04-02¶
Update Biowulf page with help topics like mounting drives locally (and the limitations thereof),
/dev/shm, fastq-dump, SSH keys, squeue output, and more.
2020-02-17¶
Add levels of skills to R page
Overhaul Python page, including reformatting skills
Updated the making-your-linux-life-easier page: recommending
rginstead ofag,visidatainstead oftabview.Major overhaul of many pages, including reorganization and the addition of “TODO” items.
2020-01-05¶
Initial version